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Mastering Testing and Debugging PySpark Applications

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Drills to master testing and debugging of PySpark applications

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Mastering Testing and Debugging PySpark ApplicationsVersion en ligne

Drills to master testing and debugging of PySpark applications

par Good Sam
1

cls.spark.stop @classmethod unittest.main 1,), (2,), (3 self.assertTrue cls.spark = SparkSession.builder if __name__ == "__main__ def tearDownClass(cls from pyspark.sql.functions import col master("local[2 value", "doubled return df.withColumn("doubled", col(column_name) * 2 def test_add_doubled_column(self class PySparkTest(unittest.TestCase result_df = add_doubled_column(df, "value from pyspark.sql import SparkSession expected_data = [(1, 2), (2, 4), (3, 6 def setUpClass(cls def add_doubled_column(df, column_name value expected_df = self.spark.createDataFrame expected_data import unittest df = self.spark.createDataFrame appName("PySparkTesting getOrCreate result_df.collect() == expected_df.collect @classmethod

Scenario 1 : Unit Testing a Data Transformation Function in PySpark
Problem : You have developed a function that transforms a DataFrame by adding a new column which doubles the values of an existing column . You need to write a unit test to validate that this function performs as expected .

Solution :

import unittest
from pyspark . sql import SparkSession
from pyspark . sql . functions import col

def add_doubled_column ( df , column_name ) :
return df . withColumn ( " doubled " , col ( column_name ) * 2 )

class PySparkTest ( unittest . TestCase ) :
@classmethod
def setUpClass ( cls ) :
cls . spark = SparkSession . builder \
. appName ( " PySparkTesting " ) \
. master ( " local [ 2 ] " ) \
. getOrCreate ( )

@classmethod
def tearDownClass ( cls ) :
cls . spark . stop ( )

def test_add_doubled_column ( self ) :
# Create a sample DataFrame
df = self . spark . createDataFrame (
[ ( 1 , ) , ( 2 , ) , ( 3 , ) ] ,
[ " value " ]
)

# Apply the transformation
result_df = add_doubled_column ( df , " value " )

# Expected DataFrame
expected_data = [ ( 1 , 2 ) , ( 2 , 4 ) , ( 3 , 6 ) ]
expected_df = self . spark . createDataFrame (
expected_data ,
[ " value " , " doubled " ]
)

# Assert that the transformed DataFrame matches the expected DataFrame
self . assertTrue (
result_df . collect ( ) = = expected_df . collect ( ) ,
" The transformed DataFrame does not match the expected DataFrame . "
)

# Run the tests
if __name__ = = " __main__ " :
unittest . main ( )

- - -












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# Create a sample DataFrame
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# Apply the transformation
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# Expected DataFrame
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# Assert that the transformed DataFrame matches the expected DataFrame
(
( ) ,
" The transformed DataFrame does not match the expected DataFrame . "
)

# Run the tests
" :
( )




Explanation :

Function Definition : add_doubled_column takes a DataFrame and a column name , then returns the DataFrame with an additional column where the values are doubled .
Unit Test Setup : Using unittest framework to structure PySpark tests , with setUpClass and tearDownClass for initializing and stopping the Spark session .
Test Method : test_add_doubled_column creates a sample DataFrame , applies the transformation , and compares the result with an expected DataFrame to ensure the function works correctly .
Assertions : Uses assertTrue with a condition that checks if the collected data from the result DataFrame matches the expected DataFrame , providing clear feedback if the test fails .
This unit testing approach is a fundamental part of developing reliable PySpark applications , allowing you to validate transformations and logic independently of the complete ETL pipeline .

2

partition_sizes = df.withColumn("partition_id", spark_partition_id()).groupBy("partition_id").agg(count("*").alias("records_per_partition partition_sizes.show from pyspark.sql.functions import spark_partition_id, count

Scenario 2 : Identifying and Resolving Data Skew in a Spark Job

Debugging Common Issues in Spark Jobs

Problem : You notice that some tasks in your Spark job are taking significantly longer than others , suggesting a possible data skew .

Solution :

from pyspark . sql . functions import spark_partition_id , count

# Analyze the distribution of data across partitions
partition_sizes = df . withColumn ( " partition_id " , spark_partition_id ( ) ) . groupBy ( " partition_id " ) . agg ( count ( " * " ) . alias ( " records_per_partition " ) )

# Check the output to identify skewed partitions
partition_sizes . show ( )








# Analyze the distribution of data across partitions
" ) )

# Check the output to identify skewed partitions
( )

Explanation :

Identify Skew : Use spark_partition_id ( ) to add a column indicating the partition ID for each row , then group by this ID and count the records in each partition . Large discrepancies in these counts suggest skew .
Resolution : Depending on the findings , consider redistributing the data either by repartitioning or using techniques like salting keys that have a large number of records .

3

complex_formula_udf = udf(complex_formula, DoubleType from pyspark.sql.functions import udf from pyspark.sql.types import DoubleType def complex_formula(x return (x * 2.54) / (x ** 0.5 + 2 df = df.withColumn("result", complex_formula_udf(df["input_column

Scenario 4 : ( Advanced Topics ) Applying a Custom Calculation to a DataFrame Column Using a UDF

Problem : You need to apply a complex mathematical formula to a column in a DataFrame , which is not directly supported by built - in Spark functions .

Solution :

from pyspark . sql . functions import udf
from pyspark . sql . types import DoubleType

# Define the UDF
def complex_formula ( x ) :
return ( x * 2 . 54 ) / ( x * * 0 . 5 + 2 )

# Register the UDF
complex_formula_udf = udf ( complex_formula , DoubleType ( ) )

# Apply the UDF to a DataFrame
df = df . withColumn ( " result " , complex_formula_udf ( df [ " input_column " ] ) )

- - - - - -








# Define the UDF
) :
)

# Register the UDF
( ) )

# Apply the UDF to a DataFrame
" ] ) )



Explanation :

UDF Definition : Create a Python function complex_formula that performs the calculation .
UDF Registration : Convert the Python function into a UDF that Spark can use , specifying DoubleType ( ) as the return type to ensure correct data handling .
Application : Use withColumn to apply the UDF to the DataFrame , creating a new column with the results of the calculation .

4

def mask_data(df, column_name from pyspark.sql.functions import col, sha2 return df.withColumn(column_name, sha2(col(column_name), 256 secure_df = mask_data(df, "sensitive_column

Scenario 6 : ( Advanced Topics ) Enforcing Data Masking on Sensitive Columns

Data Security and Governance in Spark


Problem : You need to ensure that sensitive data , such as personal identifiers , is masked or anonymized in the dataset before it is used for analysis to comply with privacy regulations .

Solution :

from pyspark . sql . functions import col , sha2

# Function to mask sensitive data
def mask_data ( df , column_name ) :
return df . withColumn ( column_name , sha2 ( col ( column_name ) , 256 ) )

# Applying data masking to the DataFrame
secure_df = mask_data ( df , " sensitive_column " )

- - - -









# Function to mask sensitive data
) :
) )

# Applying data masking to the DataFrame
" )


Explanation :

Data Masking Function : sha2 is used to hash the sensitive column data , here using a 256 - bit SHA - 2 algorithm . Hashing transforms the sensitive data into a fixed - size string , which appears random and cannot be easily reversed . This ensures that the sensitive data is anonymized while maintaining a unique identifier for records .
Application : The mask_data function applies this transformation to any specified column of the DataFrame . This method helps in protecting sensitive data and is part of data governance practices to comply with data security standards and regulations .
This solution provides a practical approach to enhancing data security in PySpark through data masking , essential for protecting sensitive information and adhering to compliance requirements in data processing workflows .

5

df.rdd.map(update_accumulator).collect my_accumulator = spark.sparkContext.accumulator({}, DictAccumulatorParam return v1 return v1[key] = v2[key else def update_accumulator(value v1[key] += v2[key if key in v1 def addInPlace(self, v1, v2 for key in v2 class DictAccumulatorParam(AccumulatorParam from pyspark import AccumulatorParam return value print(my_accumulator.value my_accumulator.add({value: 1 def zero(self, initialValue

Scenario 3 : Using Accumulators to Track Execution Metrics

Monitoring and Optimizing Spark Job Performance

Problem : You want to monitor specific operations within your Spark job , such as counting certain events or tracking the occurrence of specific conditions .

Solution :

from pyspark import AccumulatorParam

class DictAccumulatorParam ( AccumulatorParam ) :
def zero ( self , initialValue ) :
return { }

def addInPlace ( self , v1 , v2 ) :
for key in v2 :
if key in v1 :
v1 [ key ] + = v2 [ key ]
else :
v1 [ key ] = v2 [ key ]
return v1

# Create an accumulator
my_accumulator = spark . sparkContext . accumulator ( { } , DictAccumulatorParam ( ) )

# Example usage in a transformation
def update_accumulator ( value ) :
my_accumulator . add ( { value : 1 } )
return value

df . rdd . map ( update_accumulator ) . collect ( )

# Access the accumulated values
print ( my_accumulator . value )

- - - -









) :
) :
{ }

) :
:
:
]
:
]


# Create an accumulator
( ) )

# Example usage in a transformation
) :
} )


( )

# Access the accumulated values
)


Explanation :

Custom Accumulator : Define a custom accumulator that operates on dictionaries , allowing you to count occurrences of various values throughout your job .
Monitoring : Use the accumulator in a map operation or similar to increment counts based on data values or conditions encountered during job execution . This provides a way to track detailed metrics about what's happening within your Spark tasks .
Insights : After the job , inspect the values of the accumulator to gain insights into the distribution or frequency of events , which can help in debugging and understanding job behavior .
These scenarios equip you with practical methods for debugging and monitoring PySpark jobs , ensuring you can identify performance bottlenecks and operational issues , and apply effective solutions to maintain and improve job efficiency .

6

readStream option("kafka.bootstrap.servers", kafka_bootstrap_servers format("kafka kafka_topic_name = "stream_topic load option("subscribe", kafka_topic_name kafka_bootstrap_servers = 'localhost:9092' df_stream = spark getOrCreate df_stream.selectExpr("CAST(key AS STRING)", "CAST(value AS STRING format("console query = df_stream.writeStream outputMode("append spark = SparkSession.builder start from pyspark.sql import SparkSession query.awaitTermination appName("KafkaStreaming

Scenario 5 : ( Advanced Topics ) Consuming Streaming Data from Apache Kafka

Integrating with Apache Kafka for Streaming Data


Problem : You need to read streaming data from a Kafka topic for real - time processing in PySpark .

Solution :

from pyspark . sql import SparkSession

# Create a Spark session
spark = SparkSession . builder \
. appName ( " KafkaStreaming " ) \
. getOrCreate ( )

# Define Kafka parameters
kafka_topic_name = " stream_topic "
kafka_bootstrap_servers = 'localhost : 9092'

# Read from Kafka
df_stream = spark \
. readStream \
. format ( " kafka " ) \
. option ( " kafka . bootstrap . servers " , kafka_bootstrap_servers ) \
. option ( " subscribe " , kafka_topic_name ) \
. load ( )

# Processing the stream
# Here you can define transformations , for example , parsing the Kafka message
df_stream . selectExpr ( " CAST ( key AS STRING ) " , " CAST ( value AS STRING ) " )

# Start streaming
query = df_stream . writeStream \
. outputMode ( " append " ) \
. format ( " console " ) \
. start ( )

query . awaitTermination ( )

- -







# Create a Spark session
\
. " ) \
. ( )

# Define Kafka parameters
"


# Read from Kafka
\
. \
. " ) \
. ) \
. ) \
. ( )

# Processing the stream
# Here you can define transformations , for example , parsing the Kafka message
) " )

# Start streaming
\
. " ) \
. " ) \
. ( )

( )


Explanation :

Session Creation : Initialize a Spark session to handle streaming data .
Kafka Configuration : Specify the Kafka bootstrap servers and the topic you are subscribing to .
Streaming Read : Use readStream to connect to Kafka and continuously read the incoming stream .
Data Processing : Apply any necessary transformations , here converting Kafka byte messages to strings for easier handling .
Stream Output : Start the stream processing and output to the console for demonstration purposes . In production , this could be directed to databases , file systems , or other storage services .

These solutions demonstrate how to extend PySpark's capabilities to handle custom data transformations with UDFs and integrate with real - time data streams from Apache Kafka , essential skills for advanced data engineering tasks in dynamic and scalable environments .

7

selectExpr("CAST(value AS STRING) as raw_data writeStream option("subscribe", kafka_topic_name format("console sales_data = sales_stream.select outputMode("complete readStream load query.awaitTermination get_json_object(col("raw_data"), "$.amount").cast("double").alias aggregated_sales = sales_data kafka_bootstrap_servers = 'localhost:9092' appName("Real-Time Sales Aggregation window(col("timestamp"), "1 minute get_json_object(col("raw_data"), "$.timestamp").alias("timestamp query = aggregated_sales kafka_topic_name = "sales_data sales_stream = spark option("kafka.bootstrap.servers", kafka_bootstrap_servers from pyspark.sql.functions import window, col spark = SparkSession.builder format("kafka get_json_object(col("raw_data"), "$.store_id").alias("store_id start option("startingOffsets", "earliest alias("total_sales groupBy col("store_id sum("amount amount getOrCreate from pyspark.sql import SparkSession

Real - World Scenario : Processing Streaming Data from Apache Kafka with PySpark
Scenario : Real - Time Data Aggregation from Multiple Sources
Problem : You need to aggregate real - time sales data coming from multiple store locations via Apache Kafka to monitor overall sales performance and generate timely reports .

Solution :

from pyspark . sql import SparkSession
from pyspark . sql . functions import window , col

# Initialize Spark Session
spark = SparkSession . builder \
. appName ( " Real - Time Sales Aggregation " ) \
. getOrCreate ( )

# Define Kafka parameters
kafka_topic_name = " sales_data "
kafka_bootstrap_servers = 'localhost : 9092'

# Read streaming data from Kafka
sales_stream = spark \
. readStream \
. format ( " kafka " ) \
. option ( " kafka . bootstrap . servers " , kafka_bootstrap_servers ) \
. option ( " subscribe " , kafka_topic_name ) \
. option ( " startingOffsets " , " earliest " ) \
. load ( ) \
. selectExpr ( " CAST ( value AS STRING ) as raw_data " )

# Parse the streaming data
sales_data = sales_stream . select (
get_json_object ( col ( " raw_data " ) , " $ . store_id " ) . alias ( " store_id " ) ,
get_json_object ( col ( " raw_data " ) , " $ . amount " ) . cast ( " double " ) . alias ( " amount " ) ,
get_json_object ( col ( " raw_data " ) , " $ . timestamp " ) . alias ( " timestamp " )
)

# Aggregate data over a 1 - minute window
aggregated_sales = sales_data \
. groupBy (
window ( col ( " timestamp " ) , " 1 minute " ) ,
col ( " store_id " )
) \
. sum ( " amount " ) \
. alias ( " total_sales " )

# Write the results to a sink , e . g . , console for testing
query = aggregated_sales \
. writeStream \
. outputMode ( " complete " ) \
. format ( " console " ) \
. start ( )

query . awaitTermination ( )

- - -











# Initialize Spark Session
\
. " ) \
. ( )

# Define Kafka parameters
"


# Read streaming data from Kafka
\
. \
. " ) \
. ) \
. ) \
. " ) \
. ( ) \
. " )

# Parse the streaming data
(
" ) ,
( " " ) ,
" )
)

# Aggregate data over a 1 - minute window
\
. (
" ) ,
" )
) \
. " ) \
. " )

# Write the results to a sink , e . g . , console for testing
\
. \
. " ) \
. " ) \
. ( )

( )




Explanation :

Kafka Integration : The solution begins by connecting to a Kafka topic that streams sales data , ensuring all messages from the earliest are consumed .
Data Parsing : Using Spark's get_json_object to extract relevant fields from JSON formatted messages ensures that each piece of data is correctly interpreted and used for further processing .
Window - Based Aggregation : Grouping data by a time window and store ID , and then summing up sales amounts within each window , allows for real - time monitoring of sales performance across different store locations .
Output : The aggregated data is output to the console , which can be replaced with more robust storage or reporting solutions for production environments .
This solution is an example of how to handle real - time data streams efficiently , providing actionable insights that can support dynamic business operations and decision - making .

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